# filelist

dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/extras/include/seqan/alignment_free
filetypes: fffffff
filenames:
  af_d2.h/af_d2star.h/af_d2z.h/af_n2.h/alignment_free_base.h/alignment_free_comparison.h/kmer_functions.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/apps/mason
filetypes: ffffffff
filenames:
  mason.cpp/mason.h/simulate_454.h/simulate_454_base_calling.h/simulate_illumina.h/simulate_sanger.h/store_config.h/util.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/sequence
filetypes: fffffffffffffffffffffff
filenames:
  adapt_array_pointer.h/adapt_std_list.h/adapt_std_string.h/adapt_std_vector.h/iter_concat_virtual.h/segment_base.h/segment_infix.h/segment_prefix.h/segment_suffix.h/segment_utils.h/sequence_concatenator.h/sequence_interface.h/sequence_lexical.h/sequence_shortcuts.h/string_alloc.h/string_array.h/string_base.h/string_block.h/string_cstyle.h/string_set_base.h/string_set_concat_direct.h/string_set_dependent_tight.h/string_set_owner.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/apps/rabema
filetypes: fffffffffff
filenames:
  curve_smoothing.h/find_hamming_simple_ext.h/find_myers_ukkonen_ext.h/find_myers_ukkonen_reads.h/io_gsi.h/prepare_sam.cpp/rabema_build_gold_standard.cpp/rabema_evaluate.cpp/rabema_stats.h/ref_id_mapping.h/sorting.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/extras/apps/razers3
filetypes: ffffffffffffff
filenames:
  outputFormat.h/parallel_job_queue.h/parallel_misc.h/parallel_store.h/paramChooser.h/param_tabs.cpp/param_tabs.h/razers.cpp/razers.h/razers_match_filter.h/razers_matepairs.h/razers_matepairs_parallel.h/razers_paired_match_filter.h/razers_parallel.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/seq_io
filetypes: ffffff
filenames:
  fai_index.h/guess_stream_format.h/read_fasta_fastq.h/sequence_stream.h/sequence_stream_impl.h/write_fasta_fastq.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/extras/apps/rep_sep
filetypes: ffffffff
filenames:
  assembly_parser.h/column_scanner.h/rep_sep.cpp/rgraph_base.h/rgraph_construction.h/rgraph_heuristics.h/rgraph_score.h/utils.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/graph_types
filetypes: ffffffffffffffff
filenames:
  graph_base.h/graph_drawing.h/graph_edgestump.h/graph_idmanager.h/graph_impl_directed.h/graph_impl_fragment.h/graph_impl_tree.h/graph_impl_undirected.h/graph_interface.h/graph_iterator.h/graph_iterator_adjacency.h/graph_iterator_bfs.h/graph_iterator_edge.h/graph_iterator_outedge.h/graph_iterator_vertex.h/graph_property.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/random
filetypes: ffffffffff
filenames:
  ext_MersenneTwister.h/random_base.h/random_beta.h/random_beta_kfunc.h/random_geometric.h/random_lognormal.h/random_mt19937.h/random_normal.h/random_shuffle.h/random_uniform.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/arg_parse
filetypes: ffffffffff
filenames:
  arg_parse_argument.h/arg_parse_ctd_support.h/arg_parse_doc.h/arg_parse_exceptions.h/arg_parse_option.h/arg_parse_parse.h/arg_parse_type_support.h/argument_parser.h/tool_doc.h/xml_support.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/store
filetypes: ffffffffffff
filenames:
  store_align.h/store_align_intervals.h/store_all.h/store_annotation.h/store_contig.h/store_intervaltree.h/store_io.h/store_io_gff.h/store_io_sam.h/store_library.h/store_matepair.h/store_read.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/extras/apps/bs_tools
filetypes: ffffffffffffffff
filenames:
  bisar.cpp/bisar.h/bisar_base.h/bisar_score.h/bisar_score_data.h/casbar.cpp/casbar.h/casbar_alphabets.h/casbar_calling.h/casbar_consensus_realign.h/casbar_realignment.h/casbar_score.h/casbar_score_data.h/casbar_util.h/four2three.cpp/four2three.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/pipe
filetypes: ffffffffff
filenames:
  pipe_base.h/pipe_caster.h/pipe_counter.h/pipe_filter.h/pipe_namer.h/pipe_sampler.h/pipe_source.h/pool_base.h/pool_mapper.h/pool_sorter.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan
filetypes: dddddddddddddddddddddddddddd
filenames:
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dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/parallel
filetypes: ffffff
filenames:
  parallel_algorithms.h/parallel_atomic_misc.h/parallel_atomic_primitives.h/parallel_macros.h/parallel_splitting.h/parallel_tags.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/graph_align
filetypes: ffffff
filenames:
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dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/apps/splazers
filetypes: fffffff
filenames:
  outputFormat.h/paramChooser.h/razers.h/razers_matepairs.h/razers_spliced.h/readSimulator.h/splazers.cpp


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/file
filetypes: ffffffffffff
filenames:
  cstream.h/file_base.h/file_format_fasta.h/file_format_fasta_align.h/file_format_mmap.h/file_format_raw.h/file_interface.h/file_mapping.h/file_page.h/stream.h/stream_algorithms.h/string_mmap.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/extras/apps/gustaf
filetypes: fffffffff
filenames:
  create_stellarmatches_from_file.h/gustaf.cpp/gustaf_matepairs.h/msplazer.h/msplazer_algorithms.h/msplazer_main.h/msplazer_out.h/msplazer_parseOptions.h/stellar_routines.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/align
filetypes: fffffffffffffffffffffffffffffffffffffffffff
filenames:
  align_base.h/align_cols.h/align_config.h/align_metafunctions.h/align_traceback.h/alignment_algorithm_tags.h/alignment_operations.h/dp_algorithm_impl.h/dp_band.h/dp_cell.h/dp_cell_affine.h/dp_cell_linear.h/dp_formula.h/dp_formula_affine.h/dp_formula_linear.h/dp_matrix.h/dp_matrix_navigator.h/dp_matrix_navigator_score_matrix.h/dp_matrix_navigator_score_matrix_sparse.h/dp_matrix_navigator_trace_matrix.h/dp_matrix_sparse.h/dp_meta_info.h/dp_profile.h/dp_scout.h/dp_setup.h/dp_trace_segment.h/dp_traceback_adaptor.h/dp_traceback_impl.h/gap_anchor.h/gapped_value_type.h/gaps_anchor.h/gaps_array.h/gaps_base.h/gaps_iterator_anchor.h/gaps_iterator_array.h/gaps_iterator_base.h/global_alignment_banded.h/global_alignment_unbanded.h/local_alignment_banded_waterman_eggert_impl.h/local_alignment_enumeration_banded.h/local_alignment_unbanded.h/local_alignment_waterman_eggert_impl.h/matrix_base.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/graph_msa
filetypes: ffffffff
filenames:
  graph_align_tcoffee_base.h/graph_align_tcoffee_distance.h/graph_align_tcoffee_guidetree.h/graph_align_tcoffee_io.h/graph_align_tcoffee_kmer.h/graph_align_tcoffee_library.h/graph_align_tcoffee_msa.h/graph_align_tcoffee_progressive.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/extras/apps/seqan_flexbar
filetypes: fffffff
filenames:
  adapter_trimming.h/demultiplex.h/general_processing.h/read_trimming.h/seqan_flexbar.cpp/seqan_flexbar.h/seqan_flexlib.cpp


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/build/Release/core/apps
filetypes: ddddddddddddddddd
filenames:
  dfi/fiona/mason/micro_razers/pair_align/rabema/razers/razers2/sak/sam2matrix/samcat/seqan_tcoffee/seqcons/snp_store/splazers/stellar/tree_recon


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/bam_io
filetypes: fffffffffffffffffff
filenames:
  bam_alignment_record.h/bam_alignment_record_util.h/bam_header_record.h/bam_index_bai.h/bam_io_context.h/bam_reader.h/bam_sam_conversion.h/bam_stream.h/bam_tags_dict.h/bam_writer.h/cigar.h/read_bam.h/read_sam.h/sam_reader.h/sam_writer.h/write_bam.h/write_sam.h/xam_reader.h/xam_writer.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/extras/apps/mason2
filetypes: ffffffffffffffffffffffff
filenames:
  external_split_merge.cpp/external_split_merge.h/fragment_generation.h/genomic_variants.cpp/genomic_variants.h/mason_frag_sequencing.cpp/mason_genome.cpp/mason_materializer.cpp/mason_options.cpp/mason_options.h/mason_simulator.cpp/mason_types.h/mason_variator.cpp/methylation_levels.cpp/methylation_levels.h/sequencing.h/simulate_454.cpp/simulate_base.cpp/simulate_genome.cpp/simulate_illumina.cpp/simulate_sanger.cpp/variation_size_tsv.h/vcf_materialization.cpp/vcf_materialization.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/core/include/seqan/basic
filetypes: ffffffffffffffffffffffffffffffffffffffffffffffffff
filenames:
  allocator_interface.h/allocator_simple.h/allocator_singlepool.h/alphabet_adapt_builtins.h/alphabet_bio.h/alphabet_math.h/alphabet_profile.h/alphabet_qualities.h/alphabet_residue.h/alphabet_residue_tabs.h/alphabet_simple_type.h/alphabet_storage.h/array_construct_destruct.h/basic_exception.h/basic_tangle.h/basic_type.h/concept_checking.h/container_concept.h/debug_test_system.h/fundamental_comparison.h/fundamental_concepts.h/fundamental_conversion.h/fundamental_tags.h/fundamental_transport.h/holder_base.h/holder_tristate.h/hosted_type_interface.h/iterator_adapt_std.h/iterator_adaptor.h/iterator_base.h/iterator_interface.h/iterator_position.h/math_functions.h/math_log_space_value.h/metaprogramming_control.h/metaprogramming_enable_if.h/metaprogramming_logic.h/metaprogramming_type.h/pair_base.h/pair_bit_compressed.h/pair_packed.h/profiling.h/proxy_base.h/proxy_iterator.h/test_system.h/triple_base.h/triple_packed.h/tuple_base.h/tuple_bit_compressed.h/volatile_ptr.h


dirname: /usr/src/debug/seqan-1.4.2-39.fc31.arm/extras/apps/ngs_roi
filetypes: ffffffffff
filenames:
  bam2roi.cpp/png_canvas.h/project_interval.cpp/project_interval.h/project_spliced.cpp/project_spliced.h/roi_builder.cpp/roi_builder.h/roi_feature_projection.cpp/roi_plot_thumbnails.cpp


dirname: /usr/lib/debug/.build-id/5a
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dirname: /usr/lib/debug/.build-id
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dirname: /usr/lib/debug/.build-id/06
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dirname: /usr/lib/debug/usr/bin
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filenames:
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dirname: /usr/lib/debug/.build-id/16
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/include/seqan/align
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filenames:
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/include/seqan/misc
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filenames:
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/build/Release/apps
filetypes: dddddddddddddddddddddddddd
filenames:
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/include/seqan/basic
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/include/seqan/parallel
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/include/seqan/find
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filenames:
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/include/seqan/index
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/include/seqan/consensus
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/include/seqan/modifier
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filenames:
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/apps/ngs_roi
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filenames:
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dirname: /usr/src/debug/seqan2-2.4.0-7.fc30.arm/apps
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dirname: /usr/src/debug/smp_utils-0.98-15.fc31.arm/lib
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dirname: /usr/lib/debug/usr/libexec/snapd
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dirname: /usr/src/debug/snapd-2.41-1.fc31.arm/src/github.com/snapcore/snapd/overlord/snapstate/backend
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filetypes:
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dirname: /usr/src/debug/snapd-2.41-1.fc31.arm/src/github.com/snapcore/snapd/asserts
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[cell repeats an earlier one in this file: 115 characters]


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